Issue34112
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Created on 2018-07-14 16:25 by jayanthkoushik, last changed 2022-04-11 14:59 by admin. This issue is now closed.
| Files | ||||
|---|---|---|---|---|
| File name | Uploaded | Description | Edit | |
| setup.py | jayanthkoushik, 2018-07-14 16:25 | setup.py | ||
| Messages (5) | |||
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| msg321655 - (view) | Author: Jayanth Koushik (jayanthkoushik) | Date: 2018-07-14 16:25 | |
I'm trying to build 3.7.0 locally (not as superuser) on a server. I am able to successfully build without `--enable-optimizations` enabled, but the build fails with it enabled.
I have dependencies installed in custom locations as well, and this is my environment.
PREF=/scratch
export LC_ALL=C
export CC=gcc
export CXX=g++
export PATH=/opt/gcc/4.9.2/bin:$PREF/binutils/bin:/bin:/usr/bin
export LD_LIBRARY_PATH=/opt/gcc/4.9.2/lib64:/opt/gcc/4.9.2/lib:$PREF/bzip2/lib:$PREF/gdbm/lib:$PREF/libffi/lib64:$PREF/ncurses/lib:$PREF/openmpi/lib:$PREF/openssl/lib:$PREF/readline/lib:$PREF/sqlite/lib:$PREF/util-linux/lib:$PREF/xz/lib:$PREF/zlib/lib:/usr/lib64
export CPATH=/opt/gcc/4.9.2/include:$PREF/bzip2/include:$PREF/gdbm/include:$PREF/libffi/include:$PREF/ncurse
s/include:$PREF/openmpi/include:$PREF/openssl/include:$PREF/readline/include:$PREF/sqlite/include:$PREF/util
-linux/include:$PREF/xz/include:$PREF/zlib/include
I also have to update setup.py to point to the right locations for dependencies. This is the diff, and I've attached the full file.
46c46
< disabled_module_list = ["_tkinter", "_uuid"]
---
> disabled_module_list = []
544,567c544,545
< add_dir_to_list(self.compiler.library_dirs,
< '/scratch/readline/lib')
< add_dir_to_list(self.compiler.include_dirs,
< '/scratch/readline/include')
< add_dir_to_list(self.compiler.library_dirs,
< '/scratch/bzip2/lib')
< add_dir_to_list(self.compiler.include_dirs,
< '/scratch/bzip2/include')
< add_dir_to_list(self.compiler.library_dirs,
< '/scratch/ncurses/lib')
< add_dir_to_list(self.compiler.include_dirs,
< '/scratch/ncurses/include')
< add_dir_to_list(self.compiler.library_dirs,
< '/scratch/xz/lib')
< add_dir_to_list(self.compiler.include_dirs,
< '/scratch/xz/include')
< add_dir_to_list(self.compiler.library_dirs,
< '/scratch/gdbm/lib')
< add_dir_to_list(self.compiler.include_dirs,
< '/scratch/gdbm/include')
< add_dir_to_list(self.compiler.library_dirs,
< '/scratch/libffi/lib64')
< add_dir_to_list(self.compiler.include_dirs,
< '/scratch/libffi/include')
---
> add_dir_to_list(self.compiler.library_dirs, '/usr/local/lib')
> add_dir_to_list(self.compiler.include_dirs, '/usr/local/include')
835,836c813,814
< #elif self.compiler.find_library_file(lib_dirs, 'ncursesw'):
< # curses_library = 'ncursesw'
---
> elif self.compiler.find_library_file(lib_dirs, 'ncursesw'):
> curses_library = 'ncursesw'
1152c1130,1136
< sqlite_inc_paths = [ '/scratch/sqlite/include' ]
---
> sqlite_inc_paths = [ '/usr/include',
> '/usr/include/sqlite',
> '/usr/include/sqlite3',
> '/usr/local/include',
> '/usr/local/include/sqlite',
> '/usr/local/include/sqlite3',
> ]
1195a1180
> os.path.join(sqlite_incdir, '..', 'lib64'),
1196a1182,1183
> os.path.join(sqlite_incdir, '..', '..', 'lib64'),
> os.path.join(sqlite_incdir, '..', '..', 'lib'),
This is my build process.
mkdir build && cd build
LDFLAGS="-Wl,--rpath=$PREF/glibc/lib -Wl,--rpath=$PREF/bzip2/lib -Wl,--rpath=$PREF/gdbm/lib -Wl,--rpath=$PRE
F/ncurses/lib -Wl,--rpath=$PREF/openssl/lib -Wl,--rpath=$PREF/readline/lib -Wl,--rpath=$PREF/sqlite/lib -Wl,
--rpath=$PREF/xz/lib -Wl,--rpath=$PREF/zlib/lib -Wl,--rpath=$PREF/libffi/lib64 -Wl,--rpath=$PREF/openmpi/lib
-Wl,--rpath=$PREF/util-linux/lib -Wl,--dynamic-linker=$PREF/glibc/lib/ld-linux-x86-64.so.2" ../configure --
enable-shared --prefix=$PREF/python-latest --with-openssl=$PREF/openssl --enable-optimizations
make -j 8
And this is the error that I get. It's when rebuilding with optimizations.
Rebuilding with profile guided optimizations:
rm -f profile-clean-stamp
make build_all CFLAGS_NODIST=" -fprofile-use -fprofile-correction" LDFLAGS=""
make[1]: Entering directory `/scratch/src/Python-latest/build'
LD_LIBRARY_PATH=/scratch/src/Python-latest/build:/opt/gcc/4.9.2/lib64:/opt/gcc/4.9.2/lib:/scratch/bzip2/lib:/scratch/gdbm/lib:/scratch/libffi/lib64:/scratch/ncurses/lib:/scratch/openmpi/lib:/scratch/openssl/lib:/scratch/readline/lib:/scratch/sqlite/lib:/scratch/util-linux/lib:/scratch/xz/lib:/scratch/zlib/lib:/usr/lib64 ./python -E -S -m sysconfig --generate-posix-vars ;\
if test $? -ne 0 ; then \
echo "generate-posix-vars failed" ; \
rm -f ./pybuilddir.txt ; \
exit 1 ; \
fi
Could not import runpy module
Traceback (most recent call last):
File "/scratch/src/Python-latest/build/../Lib/runpy.py", line 15, in <module>
import importlib.util
File "/scratch/src/Python-latest/build/../Lib/importlib/util.py", line 14, in <module>
from contextlib import contextmanager
File "/scratch/src/Python-latest/build/../Lib/contextlib.py", line 4, in <module>
import _collections_abc
SystemError: <built-in function compile> returned NULL without setting an error
generate-posix-vars failed
make[1]: *** [pybuilddir.txt] Error 1
make[1]: Leaving directory `/scratch/src/Python-latest/build'
make: *** [profile-opt] Error 2
I tried searching for the error, and there seem to be similar errors related to improper PYTHONHOME, but I couldn't find anything related to build. I was able to build 3.6 with the same procedure, so I'm not sure if I'm doing something wrong.
|
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| msg321657 - (view) | Author: Benjamin Peterson (benjamin.peterson) * ![]() |
Date: 2018-07-14 18:33 | |
It's look you're using a fairly old toolchain. I wouldn't reccomend using fancy modern compiler optimizations with GCC 4. |
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| msg321659 - (view) | Author: Jayanth Koushik (jayanthkoushik) | Date: 2018-07-14 19:31 | |
Hi. Do you mean turning of `--enable-optimizations` or reducing GCC optimization level (O3 etc)? |
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| msg321668 - (view) | Author: Benjamin Peterson (benjamin.peterson) * ![]() |
Date: 2018-07-15 00:14 | |
--enable-optimizations On Sat, Jul 14, 2018, at 12:31, Jayanth Koushik wrote: > > Jayanth Koushik <jnkoushik@gmail.com> added the comment: > > Hi. Do you mean turning of `--enable-optimizations` or reducing GCC > optimization level (O3 etc)? > > ---------- > > _______________________________________ > Python tracker <report@bugs.python.org> > <https://bugs.python.org/issue34112> > _______________________________________ |
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| msg321684 - (view) | Author: Jayanth Koushik (jayanthkoushik) | Date: 2018-07-15 09:29 | |
Updating gcc to 8.1.0 fixed the problem. |
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| History | |||
|---|---|---|---|
| Date | User | Action | Args |
| 2022-04-11 14:59:03 | admin | set | github: 78293 |
| 2018-10-27 06:16:56 | xtreak | link | issue35074 superseder |
| 2018-07-15 09:29:00 | jayanthkoushik | set | status: open -> closed resolution: works for me messages: + msg321684 stage: resolved |
| 2018-07-15 00:14:02 | benjamin.peterson | set | messages: + msg321668 |
| 2018-07-14 19:31:10 | jayanthkoushik | set | messages: + msg321659 |
| 2018-07-14 18:33:47 | benjamin.peterson | set | nosy:
+ benjamin.peterson messages: + msg321657 |
| 2018-07-14 16:25:41 | jayanthkoushik | create | |
